The detailed information of tRNA gene sequence


Sequence ID>WENV170697612
Genome IDLGVF01162931
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 825
End posion on genome 749
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttcacatcat
tRNA gene sequence 
CGGGGCGTGGCGCAGTCTGGTAGCGCACCTGCTTTGGGAGCAGGGAGTCGGAGGTTCAAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
ttttacaatt
Secondary structure (Cloverleaf model)
>WENV170697612	Pro	TGG
                   t      ACCA ttttacaatt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      T G A        G      + | | | |     A
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GAGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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