The detailed information of tRNA gene sequence


Sequence ID>WENV170697660
Genome IDLGVF01170491
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 3948
End posion on genome 3874
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
acttttgttt
tRNA gene sequence 
CGGGGTGTAGCGCAGTTTGGCAGCGCACCTGCTTTGGGAGCAGGGGGTCGGAGGTTCAAA
TCCTCTCGCCCCGACtt
Downstream region at tRNA end position 
tgcgggaata
Secondary structure (Cloverleaf model)
>WENV170697660	Pro	TGG
                   t      ACtt tgcgggaata
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     T C T C C     A
      T G A        A      + | | | |     A
    T       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G C A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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