The detailed information of tRNA gene sequence


Sequence ID>WENV170697768
Genome IDLGVF01191043
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 300
End posion on genome 223
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ttcaccatgc
tRNA gene sequence 
GTCCCCATCGTCTAGCCTGGTCCAGGACACCGGCCTTTCACGCCGGCAGCAGGGGTTCAA
ATCCCCTTGGGGACGCCA
Downstream region at tRNA end position 
aataaaattt
Secondary structure (Cloverleaf model)
>WENV170697768	Glu	TTC
                   c      GCCA aataaaattt
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T C C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       A G G G G     C
  G         + | | |                 T T
  G         G G A C
    T C C A        A     CAGC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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