The detailed information of tRNA gene sequence


Sequence ID>WENV170697843
Genome IDLGVF01206908
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 25558
End posion on genome 25634
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaagcgaaaa
tRNA gene sequence 
GGCGAGGTAGCTCAGCTGGTTAGAGCGTCGGATTCATAACCCGGAGGTCGCGGGATCGTG
CCCCGCTCTCGCTACAA
Downstream region at tRNA end position 
ttatgtttga
Secondary structure (Cloverleaf model)
>WENV170697843	Met	CAT
                   a      ACAA ttatgtttga
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T          C G
                    T     C G C C C     T
      C G A        A      | | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 A T
    G       G A G C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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