The detailed information of tRNA gene sequence


Sequence ID>WENV170697997
Genome IDLGVF01236569
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 995
End posion on genome 903
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttaagaaac
tRNA gene sequence 
GGAGAGATGGCCGAGCTGGCTGAAGGCGCTCGCCTGCTAAGCGAGTGTGGGGCGAAAGCT
CTACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
attttatttt
Secondary structure (Cloverleaf model)
>WENV170697997	Ser	GCT
                   c      GCCA attttatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TGTGGGGCGAAAGCTCTACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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