The detailed information of tRNA gene sequence


Sequence ID>WENV170698061
Genome IDLGVF01249962
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1411
End posion on genome 1485
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taaaaatatc
tRNA gene sequence 
AGCGGGGTAGGGTAGTTAGGAGATCCCGTCGGGCTCATAACCCGGAGATCGATGGTTCGA
ATCCATCCCCCGCTAttc
Downstream region at tRNA end position 
caacactttt
Secondary structure (Cloverleaf model)
>WENV170698061	Met	CAT
                   c      Attc caacactttt
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T A C C     A
    T T G A        A      | | | | |     G
  A         T G G G       G A T G G     C
  G           | | |                 T T
  G         T C C C
    A G A          G     AGATC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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