The detailed information of tRNA gene sequence


Sequence ID>WENV170698261
Genome IDLGVF01299979
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 488
End posion on genome 565
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tattacaaag
tRNA gene sequence 
GGGCCCGTAGCTTAGTACGGTTAGAGCGCCCGGCTCATAACCGGGCGGCCAAGGGTTCAA
ATCCCTTCGGGCCCATCA
Downstream region at tRNA end position 
taaggccttt
Secondary structure (Cloverleaf model)
>WENV170698261	Met	CAT
                   g      ATCA taaggccttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T T C C C     A
    A T G A        A      | | | | |     A
  C         T T C G       A A G G G     C
  G         + | | |                 T T
  G         G A G C
    T T A          G     CGGCC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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