The detailed information of tRNA gene sequence


Sequence ID>WENV170698361
Genome IDLGVF01320378
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1365
End posion on genome 1457
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atattttttt
tRNA gene sequence 
GGAGAGATGACCGAGCTGGCCGATGGTGCTCGCCTGCTAAGCGAGTGTGGGGGTTATACT
CCACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tatgctttat
Secondary structure (Cloverleaf model)
>WENV170698361	Ser	GCT
                   t      GCCA tatgctttat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C A       G A G G G     C
  G         + | | |                 T T
  C         T G G T
    C G A          G     TGTGGGGGTTATACTCCACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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