The detailed information of tRNA gene sequence


Sequence ID>WENV170698393
Genome IDLGVF01327440
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 9076
End posion on genome 9150
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gacactttaa
tRNA gene sequence 
GGTTCCGTAGCCAAGTGGCTAAGGCAATGGACTGCAACTCCGTGATCGCCGGTTCAAATC
CGGCCGGAACCTCCA
Downstream region at tRNA end position 
tattaagatt
Secondary structure (Cloverleaf model)
>WENV170698393	Cys	GCA
                   a      TCCA tattaagatt
                     G - C
                     G - C
                     T - A
                     T - A
                     C - G
                     C - G
                     G - C          T A
                    T     C G G C C     A
      T G A        A      | | | | |     A
    G       A C C G       G C C G G     C
    G         | | |                 T T
    C       A G G C
      T A          A     GATC
                    A - T
                    T + G
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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