The detailed information of tRNA gene sequence


Sequence ID>WENV170698565
Genome IDLGVF01362847
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 263
End posion on genome 171
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttaagagatt
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTGAAGGCCCCGCTCTCGAAAAGCGGTATCCTGTCAAAAACG
GGATCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tagagaagag
Secondary structure (Cloverleaf model)
>WENV170698565	Ser	CGA
                   t      GCCA tagagaagag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        C     TATCCTGTCAAAAACGGGATC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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