The detailed information of tRNA gene sequence


Sequence ID>WENV170698757
Genome IDLGVF01408149
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 367
End posion on genome 291
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atttgcttta
tRNA gene sequence 
GGCGAGGTAGCTCAGATGGTTAGAGCGTCGGATTCATAACCCGGAGGTCACGAGTTCAAT
TCTCGTTCTCGCTACTA
Downstream region at tRNA end position 
aaaaagactg
Secondary structure (Cloverleaf model)
>WENV170698757	Met	CAT
                   a      ACTA aaaaagactg
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T          T T
                    T     T G C T C     A
      A G A        A      | | | | |     A
    T       C T C G       A C G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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