The detailed information of tRNA gene sequence


Sequence ID>WENV170698816
Genome IDLGVF01421504
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1246
End posion on genome 1169
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGGCCCGTAGCTTAGTCTGGTTGGAGCGCTCGGCTGATAACCGAGAGGTCCGGAGTTCAA
ATCTCCGCGGGCCCATCA
Downstream region at tRNA end position 
acactttttc
Secondary structure (Cloverleaf model)
>WENV170698816	Ile	GAT
                   n      ATCA acactttttc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G C C T C     A
    C T G A        A      | | | | |     A
  T         T T C G       C G G A G     C
  G         + | | |                 T T
  G         G A G C
    T T G          G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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