The detailed information of tRNA gene sequence


Sequence ID>WENV170698919
Genome IDLGVF01444086
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 388
End posion on genome 295
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cagcttatac
tRNA gene sequence 
GGAGGAATACCCAAGTCCGGCTGAAGGGATCAGTCTTGAAAACTGACAGGGCGTTTATAG
CGCCGCGGGGGTTCGAATCCCTCTTCCTCCGCCA
Downstream region at tRNA end position 
ttatcttttg
Secondary structure (Cloverleaf model)
>WENV170698919	Ser	TGA
                   c      GCCA ttatcttttg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C T C C C     A
    C T G A        A      | + | | |     G
  C         A C C C       G G G G G     C
  G           | | |                 T T
  G         A G G G
    C T G A        A     CAGGGCGTTTATAGCGCCGC
                    T - A
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK