The detailed information of tRNA gene sequence


Sequence ID>WENV170698932
Genome IDLGVF01444087
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 335220
End posion on genome 335297
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
catattttat
tRNA gene sequence 
GGACCCGTAGCTCAGTCTGGTTAGAGCTCCCGGCTCATAACCGGTAGGTCGTAGGTTCGA
GTCCTACCGGGTCCACCA
Downstream region at tRNA end position 
atttttctaa
Secondary structure (Cloverleaf model)
>WENV170698932	Met	CAT
                   t      ACCA atttttctaa
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C A T C C     A
    C T G A        A      | | | | |     G
  T         C T C G       G T A G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          T     AGGTC
                    C   T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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