The detailed information of tRNA gene sequence


Sequence ID>WENV170698936
Genome IDLGVF01444087
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 147279
End posion on genome 147189
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gctaacagtt
tRNA gene sequence 
GGAGTAGTACTCAAGTGGCTGAAGAGGTGCCCCTGCTAAGGGTATAGGTCGTTTGCGCGG
CGCGAGAGTTCAAATCTCTCCTACTCCGCCA
Downstream region at tRNA end position 
gtaaaaaatt
Secondary structure (Cloverleaf model)
>WENV170698936	Ser	GCT
                   t      GCCA gtaaaaaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T
                     G - C          T A
                    T     C T C T C     A
      T G A        A      | | | | |     A
    G       A C T C       G A G A G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGTTTGCGCGGCGC
                    T - A
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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