The detailed information of tRNA gene sequence


Sequence ID>WENV170698978
Genome IDLGVF01452608
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 744
End posion on genome 668
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
nnnnnnnttc
tRNA gene sequence 
GGCTCCGTAGCTCAGCTGGATAGAGCAACCGCCTCCTAAGCGGTAGGCCGGGCGTTCGAA
TCGCCCCGGGGCCGCCA
Downstream region at tRNA end position 
aatattaagg
Secondary structure (Cloverleaf model)
>WENV170698978	Arg	CCT
                   c      GCCA aatattaagg
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     C - G
                     G - C          T A
                    T     C C C G C     A
      C G A        A      | | | | |     G
    T       C T C G       G G G C G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGCC
                    A - T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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