The detailed information of tRNA gene sequence


Sequence ID>WENV170699247
Genome IDLGVF01514163
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1164
End posion on genome 1088
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttctaactgc
tRNA gene sequence 
GGGGCTGTAGTAGAGCTGGTTACAACGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCAAG
TCCCGTCAGCCCCGCCA
Downstream region at tRNA end position 
tttaaaacat
Secondary structure (Cloverleaf model)
>WENV170699247	Asp	GTC
                   c      GCCA tttaaaacat
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T G C C C     A
      C G A        A      + | | | |     A
    T       G A T G       G C G G G     C
    G       |   | |                 T T
    G       C A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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