The detailed information of tRNA gene sequence


Sequence ID>WENV170699275
Genome IDLGVF01519049
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 275
End posion on genome 362
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tataaataat
tRNA gene sequence 
GGAGGGGTGGCAGAGCGGCCGAATGCACCGGTCTTGAAAACCGGCGATACGAAAGTATCC
GTGGGTTCAAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170699275	Ser	TGA
                   t      GCCA nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G A C G       G T G G G     C
    G         | | |                 T T
    C       A T G C
      C G A        A     CGATACGAAAGTATCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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