The detailed information of tRNA gene sequence


Sequence ID>WENV170699321
Genome IDLGVF01528046
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 381
End posion on genome 306
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aatgagatat
tRNA gene sequence 
GGGGATGTAGCTCAGCTGGGAGAGCGCCGCCCTTGCACGGCGGAGGCCAGCGGTTCGATC
CCGCTCATCTCCACCA
Downstream region at tRNA end position 
tttttcgtat
Secondary structure (Cloverleaf model)
>WENV170699321	Ala	TGC
                   t      ACCA tttttcgtat
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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