The detailed information of tRNA gene sequence


Sequence ID>WENV170699342
Genome IDLGVF01530109
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 680
End posion on genome 754
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgaccaatga
tRNA gene sequence 
GGGCCCGTAGCTTAGGTTGGTTAGAGCGCCCGGCTCATAACCGGGCGGTCAAGGGTTCAA
ATCCCTTCGGGCCCAttc
Downstream region at tRNA end position 
tccaagcatt
Secondary structure (Cloverleaf model)
>WENV170699342	Met	CAT
                   a      Attc tccaagcatt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T T C C C     A
    T G G A        A      | | | | |     A
  T         T T C G       A A G G G     C
  G         + | | |                 T T
  G         G A G C
    T T A          G     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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