The detailed information of tRNA gene sequence


Sequence ID>WENV170699359
Genome IDLGVF01534987
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1691
End posion on genome 1604
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcagcttgc
tRNA gene sequence 
GGAGAGGTGACCGAGAGGCCGATGGTGCTCGCCTGGAAAGCGGGTGTAGTGAAAGCTACC
CGGGGTTCGAATCCCCGCCTCTCCGCCA
Downstream region at tRNA end position 
ttttagagtt
Secondary structure (Cloverleaf model)
>WENV170699359	Ser	GGA
                   c      GCCA ttttagagtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G C C C C     A
      A G A        G      | | | | |     G
    G       G C C A       C G G G G     C
    G       + | | |                 T T
    C       T G G T
      C G A        G     TGTAGTGAAAGCTACC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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