The detailed information of tRNA gene sequence


Sequence ID>WENV170699455
Genome IDLGVF01556427
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1204
End posion on genome 1295
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttttgcgttt
tRNA gene sequence 
GGAGAGGTGGCAGAGTCCGGTTGAACGCGGTAGTCTTGAAAACTATTGAAGGTGTGAGCC
TTCCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tatggcaata
Secondary structure (Cloverleaf model)
>WENV170699455	Ser	TGA
                   t      GCCA tatggcaata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  C         G A C G       G G G G G     C
  G             | |                 T T
  G         A C G C
    T T G A        G     TGAAGGTGTGAGCCTTCC
                    G + T
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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