The detailed information of tRNA gene sequence


Sequence ID>WENV170699557
Genome IDLGVF01585543
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 363
End posion on genome 289
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tgattctgat
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGCTAGAGCGCTACATTTGCAATGTAGAGGTCATGGGTTCGAT
TCCCCTCAGGTCCACtc
Downstream region at tRNA end position 
ttaaggtttt
Secondary structure (Cloverleaf model)
>WENV170699557	Ala	TGC
                   t      ACtc ttaaggtttt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          T T
                    T     T C C C C     A
      T G A        A      |   | | |     G
    T       C T C G       A T G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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