The detailed information of tRNA gene sequence


Sequence ID>WENV170699621
Genome IDLGVF01602470
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1516
End posion on genome 1423
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tcttgagaac
tRNA gene sequence 
GGAAGTGTTTCGTCACCGGTGTGGCGCCTGGACTTCAAATCCAGTGGACGGGCTAACCCT
CGTCGGTAGGTTCGACTCCTATACACTTCCGCCA
Downstream region at tRNA end position 
tattcactct
Secondary structure (Cloverleaf model)
>WENV170699621	SeC(p)	TCA
                   c      GCCA tattcactct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     T - A          T C
                    T     T A T C C     A
      C C A        T      + | | | |     G
    G       C T G C       G T A G G     C
    G       | + | |                 T T
    T       G G C G
      G T          C     TGGACGGGCTAACCCTCGTCG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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