The detailed information of tRNA gene sequence


Sequence ID>WENV170699705
Genome IDLGVF01631458
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 429
End posion on genome 340
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttcacttcgc
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTCGAACGGGGCGGTCTCGAAAACCGTTGAGCCTTTGCGGGTT
CCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
gataattgac
Secondary structure (Cloverleaf model)
>WENV170699705	Ser	CGA
                   c      GCCA gataattgac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       C A G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGAGCCTTTGCGGGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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