The detailed information of tRNA gene sequence


Sequence ID>WENV170699739
Genome IDLGVF01643387
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 503
End posion on genome 428
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaaatacat
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGCAGCTCGTCGGGCTCATAACCCGGAGGTCGTAGGTTCGAAT
CCTGCCTCCGCAACCA
Downstream region at tRNA end position 
atattatggc
Secondary structure (Cloverleaf model)
>WENV170699739	Met	CAT
                   t      ACCA atattatggc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | + | | |     G
    T       C G A G       G T A G G     C
    G       | | | |                 T T
    G       G C T C
      C A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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