The detailed information of tRNA gene sequence


Sequence ID>WENV170699783
Genome IDLGVF01660003
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 390
End posion on genome 315
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgcaataaa
tRNA gene sequence 
GGGCCAATAGCTCAGTTGGTAGAGCCCCCGGCTCATAACCGGATGGTCCCAGGTTCGAAT
CCTGGTTGGCCCACCA
Downstream region at tRNA end position 
tcaaaatatc
Secondary structure (Cloverleaf model)
>WENV170699783	Met	CAT
                   a      ACCA tcaaaatatc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T          T A
                    T     G G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          C     TGGTC
                    C   A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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