The detailed information of tRNA gene sequence


Sequence ID>WENV170700675
Genome IDLJSS01000082
Search identical group
Phylum/Class[LJSS] hot springs metagenome; water from Lobios Hot Spring
Species
Start position on genome 1090
End posion on genome 1001
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tatagaatga
tRNA gene sequence 
GGAGAGGTGGCCGAGAGGCCGAAGGCGGCTCCCTGCTAAGGAGTTGTAGGGTTAAAAGCC
CTACCGCGGGTTCGAATCCCGCCCTCTCCGttt
Downstream region at tRNA end position 
aggagaaaaa
Secondary structure (Cloverleaf model)
>WENV170700675	Ser	GCT
                   a      Gttt aggagaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TGTAGGGTTAAAAGCCCTACC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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