The detailed information of tRNA gene sequence


Sequence ID>WENV170700709
Genome IDLJSS01000332
Search identical group
Phylum/Class[LJSS] hot springs metagenome; water from Lobios Hot Spring
Species
Start position on genome 227
End posion on genome 140
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
acttccccgc
tRNA gene sequence 
GGAGGGTTGGCCGAATAGGCAAGGCACCGGTCTTGAAAACCGGCGGGTCGCACGACCCTT
GTGGGTTCGAATCCCACACCCTCCGCCA
Downstream region at tRNA end position 
catccactcg
Secondary structure (Cloverleaf model)
>WENV170700709	Ser	TGA
                   c      GCCA catccactcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C A C C C     A
      T A A        G      | | | | |     G
    A       G C C G       G T G G G     C
    G         | | |                 T T
    G       A G G C
      C A          A     CGGGTCGCACGACCCTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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