The detailed information of tRNA gene sequence


Sequence ID>WENV170700895
Genome IDLJSS01006493
Search identical group
Phylum/Class[LJSS] hot springs metagenome; water from Lobios Hot Spring
Species
Start position on genome 236
End posion on genome 312
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cagagaaaag
tRNA gene sequence 
AGGCCGTTAGCTCAGCCCGGTAGAGCACTTGTCTCCAAAACGAGGTGTCGGAGGTTCGAA
TCCTTCACGGCCCGCCA
Downstream region at tRNA end position 
gaccgtccag
Secondary structure (Cloverleaf model)
>WENV170700895	Trp	CCA
                   g      GCCA gaccgtccag
                     A   C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     C T T C C     A
      C G A        A      | + | | |     G
    C       C T C G       G G A G G     C
    C       | | | |                 T T
    G       G A G C
      G T A        A     GTGTC
                    C - G
                    T - A
                    T + G
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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