The detailed information of tRNA gene sequence


Sequence ID>WENV170701010
Genome IDLKGT01000926
Search identical group
Phylum/Class[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP
Species
Start position on genome 2258
End posion on genome 2184
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
nctgatnatt
tRNA gene sequence 
GGGCCGGTCGTCTAGTCNGGTAGGATAGGTGCATGGCATGCATCGGATCGAGGGTTCAAA
TCCCTTCCGGTCCACtn
Downstream region at tRNA end position 
tttnttnntn
Secondary structure (Cloverleaf model)
>WENV170701010	Ala	GGC
                   t      ACtn tttnttnntn
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        C      + | | | |     A
    C       T C T G       G A G G G     C
    N       + | | +                 T T
    G       G G A T
      G T A        A     GGATC
                    G - C
                    G + T
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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