The detailed information of tRNA gene sequence


Sequence ID>WENV170701154
Genome IDLKGT01003839
Search identical group
Phylum/Class[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP
Species
Start position on genome 112
End posion on genome 38
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtcttggtac
tRNA gene sequence 
AGGGGCGTAGGTTCAACGGTAGACCGCCGGTCTCCAAAACCGGATGTGGGGGTTCGAATC
CCTCCGCCCCTGCCA
Downstream region at tRNA end position 
tcggcgctgt
Secondary structure (Cloverleaf model)
>WENV170701154	Trp	CCA
                   c      GCCA tcggcgctgt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      A A C        A      | + | | |     G
    C       T T G G       G G G G G     C
    G       + | | |                 T T
    G       G A C C
      T A          G     ATGT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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