The detailed information of tRNA gene sequence


Sequence ID>WENV170701179
Genome IDLKGT01004246
Search identical group
Phylum/Class[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP
Species
Start position on genome 236
End posion on genome 163
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ctttctggtG
tRNA gene sequence 
GCCTTCGTAGTACAGTGGCTAGTATAGGGGATTGTGGATCCCCGGACAGGGGTTCGATTC
CCCTCGAGGGCCTac
Downstream region at tRNA end position 
ataatttttt
Secondary structure (Cloverleaf model)
>WENV170701179	His	GTG
                   G      CTac ataatttttt
                     G - C
                     C - G
                     C - G
                     T + G
                     T - A
                     C - G
                     G - C          T T
                    T     T C C C C     A
      T G A        A      | | | | |     G
    G       C A T G       A G G G G     C
    G       | | | +                 T T
    C       G T A T
      T A          A     GGAC
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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