The detailed information of tRNA gene sequence


Sequence ID>WENV170701193
Genome IDLKGT01004642
Search identical group
Phylum/Class[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP
Species
Start position on genome 2413
End posion on genome 2337
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tctgatnatt
tRNA gene sequence 
GGGCCGGTCGTCTAGTCCGGTAGGATAGGTGCATGGCATGCATCGGATCGAGGGTTCAAA
TCCCTTCCGGTCCACTA
Downstream region at tRNA end position 
ttttttcaat
Secondary structure (Cloverleaf model)
>WENV170701193	Ala	GGC
                   t      ACTA ttttttcaat
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        C      + | | | |     A
    C       T C T G       G A G G G     C
    C       + | | +                 T T
    G       G G A T
      G T A        A     GGATC
                    G - C
                    G + T
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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