The detailed information of tRNA gene sequence


Sequence ID>WENV170701217
Genome IDLKGT01004947
Search identical group
Phylum/Class[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP
Species
Start position on genome 3882
End posion on genome 3958
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tttttatcaR
tRNA gene sequence 
GCTCCTATAGTGTAGTCCGGTTAAGCATTTTGGCTTCTCAAGCCAAAGACTCGGGTTCAA
ATCCCGATGGGAGCATta
Downstream region at tRNA end position 
cacwtttggt
Secondary structure (Cloverleaf model)
>WENV170701217	Glu	CTC
                   R      ATta cacwtttggt
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     T + G
                     A - T          T A
                    T     A G C C C     A
    C T G A        A      | | | | |     A
  C         T G T G       T C G G G     C
  G         + | | +                 T T
  G         G C A T
    T T A A        T     AGAC
                    T - A
                    T - A
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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