The detailed information of tRNA gene sequence


Sequence ID>WENV170701225
Genome IDLKGT01005128
Search identical group
Phylum/Class[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP
Species
Start position on genome 2827
End posion on genome 2752
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaggagtana
tRNA gene sequence 
AGGAGTGTAGCTCAATTGGCAGAGCACCGGTCTCCAAAACCGGGGGTTGTGGGTTCGAGT
CCCTCCACTCCTGCCA
Downstream region at tRNA end position 
acctccgaat
Secondary structure (Cloverleaf model)
>WENV170701225	Trp	CCA
                   a      GCCA acctccgaat
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T A A        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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