The detailed information of tRNA gene sequence


Sequence ID>WENV170701336
Genome IDLKGT01007027
Search identical group
Phylum/Class[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP
Species
Start position on genome 16660
End posion on genome 16734
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
actgacagat
tRNA gene sequence 
GGGCCGGTCGTCTAGTCCGGTAGGATAGGTGCATGGCATGCATCGGATCGAGGGTTCAAA
TCCCTTCCGGTCCACtt
Downstream region at tRNA end position 
tttttcaatt
Secondary structure (Cloverleaf model)
>WENV170701336	Ala	GGC
                   t      ACtt tttttcaatt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        C      + | | | |     A
    C       T C T G       G A G G G     C
    C       + | | +                 T T
    G       G G A T
      G T A        A     GGATC
                    G - C
                    G + T
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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