The detailed information of tRNA gene sequence


Sequence ID>WENV170701351
Genome IDLKGT01007496
Search identical group
Phylum/Class[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP
Species
Start position on genome 475
End posion on genome 400
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gccgatcgac
tRNA gene sequence 
GTCCCCTTCGTCTAGAGGCCCAGGACACCGGCCTCTCACGCCGGCAACAGGGGTTCGAAT
CCCCTAGGGGACGCCA
Downstream region at tRNA end position 
actatttcaa
Secondary structure (Cloverleaf model)
>WENV170701351	Glu	CTC
                   c      GCCA actatttcaa
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C C A        A     CAAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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