The detailed information of tRNA gene sequence


Sequence ID>WENV170701415
Genome IDLKGT01008604
Search identical group
Phylum/Class[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP
Species
Start position on genome 3253
End posion on genome 3180
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttttnanaaN
tRNA gene sequence 
GGTACTCTGGCAGAACGGTTATGCGTGGGCCTGCAAAGCCTATACAAGGGGGTTCGACTC
CCTCGGGTACCTTat
Downstream region at tRNA end position 
tcnacnatna
Secondary structure (Cloverleaf model)
>WENV170701415	Cys	GCA
                   N      TTat tcnacnatna
                     G - C
                     G - C
                     T - A
                     A - T
                     C - G
                     T + G
                     C - G          T C
                    T     C T C C C     A
        A A        G      | + | | |     G
      C     G A C G       G G G G G     C
      G       | | |                 T T
      G     A T G C
        T T        G     TACAA
                    T - A
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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