The detailed information of tRNA gene sequence


Sequence ID>WENV170701475
Genome IDLKGT01009348
Search identical group
Phylum/Class[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP
Species
Start position on genome 5519
End posion on genome 5593
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gcctatctct
tRNA gene sequence 
AGGCGCGTAGCTCAGTGGTAGAGCACTACCTTGACATGGTAGGGGTCGGTGGTTCGATCC
CACTCGCGCCTACCA
Downstream region at tRNA end position 
atttcacgct
Secondary structure (Cloverleaf model)
>WENV170701475	Val	GAC
                   t      ACCA atttcacgct
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          C T
                    T     T C A C C     A
        G A        A      + | | | |     G
      T     C T C G       G G T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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