The detailed information of tRNA gene sequence


Sequence ID>WENV170701481
Genome IDLKGT01009529
Search identical group
Phylum/Class[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP
Species
Start position on genome 14351
End posion on genome 14274
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttttnatcag
tRNA gene sequence 
GCTCCTATAGTGTAGTCCGGTTAAGCATTTTGGCTTCTCAAGCCAAAGACTCGGGTTCAA
ATCCCGATGGGAGCACTA
Downstream region at tRNA end position 
aacatatgtg
Secondary structure (Cloverleaf model)
>WENV170701481	Glu	CTC
                   g      ACTA aacatatgtg
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     T + G
                     A - T          T A
                    T     A G C C C     A
    C T G A        A      | | | | |     A
  C         T G T G       T C G G G     C
  G         + | | +                 T T
  G         G C A T
    T T A A        T     AGAC
                    T - A
                    T - A
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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