The detailed information of tRNA gene sequence


Sequence ID>WENV170701552
Genome IDLKGT01010718
Search identical group
Phylum/Class[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP
Species
Start position on genome 1260
End posion on genome 1185
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tgtgtgtctg
tRNA gene sequence 
GCCCATATAGCTCAGTCGGTAGAGCACTTCCTTGGTAAGGAAGAGGTCACCGGTTCAAAT
CCGGTTGTGGGCTCCA
Downstream region at tRNA end position 
gcttgtaatc
Secondary structure (Cloverleaf model)
>WENV170701552	Thr	GGT
                   g      TCCA gcttgtaatc
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T + G
                     A - T          T A
                    T     T G G C C     A
      T G A        A      | | | | |     A
    C       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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