The detailed information of tRNA gene sequence


Sequence ID>WENV170701563
Genome IDLKGT01010825
Search identical group
Phylum/Class[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP
Species
Start position on genome 9873
End posion on genome 9949
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caatgatcaa
tRNA gene sequence 
TGCGGGGTGGAGCAGTTCGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCAGGTTCAAA
TCCTGCCCCCGCAACCA
Downstream region at tRNA end position 
aatccgattg
Secondary structure (Cloverleaf model)
>WENV170701563	Met	CAT
                   a      ACCA aatccgattg
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    T       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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