The detailed information of tRNA gene sequence


Sequence ID>WENV170702075
Genome IDLKMJ01000451
Search identical group
Phylum/Class[LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake
Species
Start position on genome 27080
End posion on genome 26993
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcaacaatgc
tRNA gene sequence 
GGAGGGGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTAAGTCGAAAGGCTTC
GAGGGTTCGAATCCCTCCCCCTCCGCCA
Downstream region at tRNA end position 
cgaatttaaa
Secondary structure (Cloverleaf model)
>WENV170702075	Ser	GGA
                   c      GCCA cgaatttaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      C G A        G     TAAGTCGAAAGGCTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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