The detailed information of tRNA gene sequence


Sequence ID>WENV170702162
Genome IDLKMJ01000740
Search identical group
Phylum/Class[LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake
Species
Start position on genome 17417
End posion on genome 17336
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gaccatgtga
tRNA gene sequence 
GGTGAGGTGGCAGAGCGGCCTAATGCGCCTGCCTTGAAAGCAGGTGGCGCAAGCCTCATG
GGTTCGAATCCCATCCTCACCGttt
Downstream region at tRNA end position 
tctgatgacc
Secondary structure (Cloverleaf model)
>WENV170702162	Ser	TGA
                   a      Gttt tctgatgacc
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
      C G A        G      | | | | |     G
    G       G A C G       A T G G G     C
    G         | | |                 T T
    C       A T G C
      C T A        G     TGGCGCAAGCCTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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