The detailed information of tRNA gene sequence


Sequence ID>WENV170702270
Genome IDLKMJ01001179
Search identical group
Phylum/Class[LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake
Species
Start position on genome 9220
End posion on genome 9132
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atagtgtaaT
tRNA gene sequence 
GGAAAGGTGGCAGAGTGGTTGATTGCACCAATTTTGAAAATTGGCGTGGCTTAACGGTCA
CCGGGGGTTCGAATCCCTCCCTTTCCGAaa
Downstream region at tRNA end position 
atcatattaa
Secondary structure (Cloverleaf model)
>WENV170702270	Ser	TGA
                   T      GAaa atcatattaa
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    T       T T G C
      T G A        A     CGTGGCTTAACGGTCACC
                    C - G
                    C - G
                    A - T
                    A - T
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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