The detailed information of tRNA gene sequence


Sequence ID>WENV170702317
Genome IDLKMJ01001260
Search identical group
Phylum/Class[LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake
Species
Start position on genome 11007
End posion on genome 10920
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaaagacaag
tRNA gene sequence 
GGAGAAGTGTCTGAGTGGCCGAAAGAGCGCGATTGCTAATCGTGTGTACGGATACCCCGT
ACCGAGGGTTCGAATCCCTCCTTCTCCGaat
Downstream region at tRNA end position 
tagaagagat
Secondary structure (Cloverleaf model)
>WENV170702317	Ser	GCT
                   g      Gaat tagaagagat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C T       G A G G G     C
    G         | | |                 T T
    C       A A G A
      C G A        G     TGTACGGATACCCCGTACC
                    C - G
                    G + T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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