The detailed information of tRNA gene sequence


Sequence ID>WENV170702443
Genome IDLKMJ01001960
Search identical group
Phylum/Class[LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake
Species
Start position on genome 11279
End posion on genome 11362
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tggtaactga
tRNA gene sequence 
GGTGGGGTGGCAGAGCGGCCTAACGCGCCTGCCTTGAGAGCAGGTGGCTGTCAAGCCTCA
TGGGTTCAAATCCCATCCCCACCGttt
Downstream region at tRNA end position 
tccgcgatca
Secondary structure (Cloverleaf model)
>WENV170702443	Ser	TGA
                   a      Gttt tccgcgatca
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
      C G A        G      | | | | |     A
    G       G A C G       A T G G G     C
    G           | |                 T T
    C       A C G C
      C T A        G     TGGCTGTCAAGCCTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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