The detailed information of tRNA gene sequence


Sequence ID>WENV170702459
Genome IDLKMJ01002013
Search identical group
Phylum/Class[LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake
Species
Start position on genome 16431
End posion on genome 16520
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttgcatttgT
tRNA gene sequence 
GCCGGAGTGACTGAGTGGCTAAAGGTGCCAGCCTGGAAAGCTGGTGAGCGTCACAGCTCT
CCTGGGTTCAAATCCCAGCTCCGGCGTCA
Downstream region at tRNA end position 
acctatttct
Secondary structure (Cloverleaf model)
>WENV170702459	Ser	GGA
                   T      GTCA acctatttct
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     G A C C C     A
      T G A        G      | | | | |     A
    G       G T C A       C T G G G     C
    G         + | |                 T T
    C       A G G T
      T A A        G     TGAGCGTCACAGCTCTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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