The detailed information of tRNA gene sequence


Sequence ID>WENV170702660
Genome IDLKMJ01003371
Search identical group
Phylum/Class[LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake
Species
Start position on genome 2640
End posion on genome 2556
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
accactgact
tRNA gene sequence 
GGTGGGGTGGCAGAGCGGCCTATTGCGTTTGCCTTGAGAGCAAATGTCCGAGAGGACTCC
TGGGTTCAAATCCCAGCCCCACCGCat
Downstream region at tRNA end position 
tgtctccgag
Secondary structure (Cloverleaf model)
>WENV170702660	Ser	TGA
                   t      GCat tgtctccgag
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G A C C C     A
      C G A        G      | | | | |     A
    G       G A C G       C T G G G     C
    G       + | | |                 T T
    C       T T G C
      C T A        G     TGTCCGAGAGGACTC
                    T - A
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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